Index

Symbols

--auto-calibrate deeplc-predict command line option --finetune deeplc-predict command line option --logging-level deeplc command line option --model deeplc-predict command line option --native deeplc-gui command line option --output deeplc-predict command line option --psm-filetype deeplc-predict command line option --reference deeplc-predict command line option

--reference-filetype deeplc-predict command line option --version deeplc command line option -l deeplc command line option -m deeplc-predict command line option -o deeplc-predict command line option -r deeplc-predict command line option -rt deeplc-predict command line option -t deeplc-predict command line option

C

calibrate() (in module deeplc) calibrate_max (deeplc.calibration.PiecewiseLinearCalibration property)

calibrate_min (deeplc.calibration.PiecewiseLinearCalibration property) Calibration (class in deeplc.calibration) CalibrationError

D

deeplc module deeplc command line option --logging-level --version -l deeplc-gui command line option --native deeplc-predict command line option --auto-calibrate --finetune --model --output --psm-filetype --reference --reference-filetype -m -o -r -rt -t PSMS

deeplc.calibration module deeplc.data module deeplc.exceptions module DeepLCDataset (class in deeplc.data) DeepLCError

F

finetune() (in module deeplc) finetune_and_predict() (in module deeplc) fit() (deeplc.calibration.Calibration method) (deeplc.calibration.IdentityCalibration method) (deeplc.calibration.PiecewiseLinearCalibration method) (deeplc.calibration.SplineTransformerCalibration method)

from_psm_list() (deeplc.data.DeepLCDataset class method)

G

get_calibration_curve() (deeplc.calibration.PiecewiseLinearCalibration method)

I

IdentityCalibration (class in deeplc.calibration) is_fitted (deeplc.calibration.Calibration property) (deeplc.calibration.IdentityCalibration property) (deeplc.calibration.PiecewiseLinearCalibration property) (deeplc.calibration.SplineTransformerCalibration property)

M

module deeplc deeplc.calibration deeplc.data deeplc.exceptions

P

PiecewiseLinearCalibration (class in deeplc.calibration) predict() (in module deeplc)

predict_and_calibrate() (in module deeplc) PSMS deeplc-predict command line option

R

ReferenceSelectionError

S

save_model() (in module deeplc)

SplineTransformerCalibration (class in deeplc.calibration) split_datasets() (in module deeplc.data)

T

train() (in module deeplc) transform() (deeplc.calibration.Calibration method) (deeplc.calibration.IdentityCalibration method) (deeplc.calibration.PiecewiseLinearCalibration method) (deeplc.calibration.SplineTransformerCalibration method)